Augustus | Tool name | Augustus |
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| URL | http://augustus.gobics.de/submission |
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| Important features | |
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| Citations | Stanke M, Keller O, Gunduz I, Hayes A, Waack S, Morgenstern B. AUGUSTUS: ab initio prediction of alternative transcripts. Nucleic AcIDs Res. 2006 Jul 1;34(Web Server issue):W435-9. PubMed PMID: 16845043; PubMed Central PMCID:
PMC1538822.
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| Year of publication | 2006 |
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| Rank by usage frequency | 99 |
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| Comments | 1) This method allows approximation of the true intron length distribution more accurately than do existing programs. 2) It gives alignment results.These can be downloaded as well. 3) Gives predicted coding sequences. |
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| Function | Species, Finds alternative splicing in human, Finds alternative splicing in Arabidopsis, Finds alternative splicing in Drosophila, Finds alternative splicing in other species |
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| Category | |
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| Input file format | FASTA sequence, cDNA (mRNA or EST) Sequence |
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| Output file format | |
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| Limitation | |
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